Our Lab

The main focus of the research of the Soils lab is the interplay between soil microbial communities and nutrient cycling in terrestrial ecosystems. We hope to better understand the link between microbial, both fungal and bacterial, community composition and ecosystem functions, with an interest in how human activities (climate change, nitrogen deposition, etc.) affect this linkage. We combine data and information from microbial ecology, soil science and soil chemistry using methods from all these approaches to examine below-ground dynamics, and in particular as it relates to nutrient cycling.

Donald R. Zak

Alexander H. Smith Distinguished University Professor of Ecology,

Arthur F. Thurnau Professor,


Burton V. Barnes Collegiate Professor of Ecology

University of Michigan
School for Environment and Sustainability

News

Morgan’s paper is out!

Morgan McPherson, a joint post-doctoral scholar in the Zak and Ibáñez lab at SEAS, has a new paper out titled "Arbuscular mycorrhizal diversity increases across a plant productivity gradient driven by soil nitrogen availability". This study characterized the arbuscular mycorrhizal fungi (AMF) in soils across a plant productivity gradient, coinciding with a nitrogen mineralization gradient.  The soils were associated with Red and Sugar Maple trees in Manistee National Forest, which are known AMF host species.  AMF-specific 18S rDNA targeted-gene libraries were constructed using in-lab designed primers to examine the communities and diversity of AMF.  Their diversity significantly increased along the...
Read More

Aspirnaut Olises Perez in the Zak lab

This summer the Zak lab had the opportunity to host Olises Perez as part of the Aspirnaut program. The Aspirnaut Summer Research Internship Program, administered by Life Sciences Institute (LSI), brings rising Michigan high school seniors to UM to give them hands-on lab experience over a 6-week period. The goal is to encourage students, especially those in disadvantaged communities, to strive for education and careers in various STEM fields. Each Aspirnaut works with a mentor to conduct their own research, then presents their results to their peers and other mentors. The project that Olises worked on while in the Zak...
Read More

Zak lab paper out!

Brooke Propson, a PhD student at the University of Wisconsin, whom works in Zac Freedman's lab (former Zak lab post-doc), studied the ecosystem response and recovery after the long-term elevated nitrogen treatment was stopped. There is also a natural gradient of ambient N deposition due to human activity at these sites, as well. The study showed that the C in the organic horizon that has previously accumulated from N-treatment has been lost with added deficits post-termination of the treatment with the exception of the northernmost site (least ambient N), showing a shift in mechanistic microbial activity. The mineral soil C...
Read More

Zak lab paper out!

Sam Schaffer-Morrison, former SEAS student and current PhD in EEB at Michigan, has a review out with Don that argues that functional traits of mycorrhizal fungi should be included for consideration when belowground functional traits are being examined. These are incredibly important symbionts could add key mechanistic factors for plant performance (via nutrient uptake) if included in plant-soil discussions. They propose several key fungal traits that are measurable and ways to incorporate them into future research. This paper is out in Ecosphere here.
Read More

Forest Ecology Out!

A revised 5th edition of Forest Ecology (ISBN 1119476089) is out now! Don is one of the co-authors. It has been 25 years since the previous edition and the authors wanted to retain the overall focus from the previous edition (ecosystem level), but update the text to include information about new ecological concepts and methods, and critical areas interest like sustainability. Don took a lot of care (and an enormous investment in time) to update the text, images and references for all the chapters that he worked on. It's out now and you can get it most book sellers (and...
Read More

Will’s paper is out

Will Argiroff, former PhD student in SEAS, has a new paper out titled "Fungal community composition and genetic potential regulate fine root decay in northern temperate forests" that examined if fine root litter (~50% total litter production in forest ecosystems and fairly recalcitrant) decayed more rapidly when fungal communities have more genes that are known to degrade litter. The study also looked into if you could classify fungi by saprotrophic or ectomycorrhizal functional groups by the genes present. Fine roots were placed in forest sites and the fungal communities were sequenced, which where then compared to available fungal genomes to...
Read More
Scroll to top